Here is a non-exhaustive list of research papers in which the PISCES biogeochemical model has been used.
Gorgues, T; Menkes, C; Aumont, O; Dandonneau, Y; Madec, G; Rodgers, K Indonesian throughflow control of the eastern equatorial Pacific biogeochemistry Journal Article In: Geophys. Res. Lett., vol. 34, no. 5, pp. L05609, 2007, ISSN: 0094-8276. Naegler, Tobias; Ciais, Philippe; Orr, James C; Aumont, Olivier; Rödenbeck, Christian On evaluating ocean models with atmospheric potential oxygen Journal Article In: Tellus B, vol. 59, no. 1, pp. 138–156, 2007. Najjar, R G; Jin, X; Louanchi, F; Aumont, O; Caldeira, K; Doney, S C; Dutay, J -C; Follows, M; Gruber, N; Joos, F; Lindsay, K; Maier-Reimer, E; Matear, R J; Matsumoto, K; Monfray, P; Mouchet, A; Orr, J C; Plattner, G -K; Sarmiento, J L; Schlitzer, R; Slater, R D; Weirig, M -F; Yamanaka, Y; Yool, A In: Global Biogeochemical Cycles, vol. 21, no. 3, pp. GB3007, 2007, ISSN: 1944-9224. Gehlen, M; Gangstø, R; Schneider, B; Bopp, L; Aumont, O; Ethe, C The fate of pelagic CaCO3 production in a high CO2 ocean: a model study Journal Article In: Biogeosciences, vol. 4, no. 4, pp. 505–519, 2007, ISSN: 1726-4189. Buitenhuis, E; Quéré, Le C; Aumont, O; Bunker, A; Hirst, A; Ikeda, T; O'Brien, T; Pontkiovski, S; Straile, D Biogeochemical fluxes through mesozooplankton Journal Article In: Global Biogeochem. Cycles, 2006, (Submitted). Carr, Mary-Elena; Friedrichs, Marjorie A M; Schmeltz, Marjorie; Aita, Maki Noguchi; Antoine, David; Arrigo, Kevin R; Asanuma, Ichio; Aumont, Olivier; Barber, Richard; Behrenfeld, Michael; Bidigare, Robert; Buitenhuis, Erik T; Campbell, Janet; Ciotti, Aurea; Dierssen, Heidi; Dowell, Mark; Dunne, John; Esaias, Wayne; Gentili, Bernard; Gregg, Watson; Groom, Steve; Hoepffner, Nicolas; Ishizaka, Joji; Kameda, Takahiko; Quéré, Corinne Le; Lohrenz, Steven; Marra, John; Mélin, Frédéric; Moore, Keith; Morel, André; Reddy, Tasha E; Ryan, John; Scardi, Michele; Smyth, Tim; Turpie, Kevin; Tilstone, Gavin; Waters, Kirk; Yamanaka, Yasuhiro A comparison of global estimates of marine primary production from ocean color Journal Article In: Deep Sea Research Part II: Topical Studies in Oceanography, vol. 53, no. 5–7, pp. 741–770, 2006, ISSN: 0967-0645. Aumont, O; Bopp, L Globalizing results from ocean in situ iron fertilization studies Journal Article In: Global Biogeochemical Cycles, vol. 20, no. 2, pp. n/a–n/a, 2006, ISSN: 08866236. Gehlen, M; Bopp, L; Emprin, N; Aumont, O; Heinze, C; Kriest, I; Ragueneau, O Reconciling surface ocean productivity, export fluxes and sediment composition in a global biogeochemical ocean model Journal Article In: Biogeosciences, vol. 3, pp. 521–537, 2006. Raynaud, S; Orr, J C; Aumont, O; Rodgers, K B; Yiou, P Interannual-to-decadal variability of North Atlantic air-sea CO2 fluxes Journal Article In: Ocean Sci., vol. 2, no. 1, pp. 43–60, 2006, ISSN: 1812-0792. Orr, James C; Fabry, Victoria J; Aumont, Olivier; Bopp, Laurent; Doney, Scott C; Feely, Richard A; Gnanadesikan, Anand; Gruber, Nicolas; Ishida, Akio; Joos, Fortunat; Key, Robert M; Lindsay, Keith; Maier-Reimer, Ernst; Matear, Richard; Monfray, Patrick; Mouchet, Anne; Najjar, Raymond G; Plattner, Gian-Kasper; Rodgers, Keith B; Sabine, Christopher L; Sarmiento, Jorge L; Schlitzer, Reiner; Slater, Richard D; Totterdell, Ian J; Weirig, Marie-France; Yamanaka, Yasuhiro; Yool, Andrew Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms Journal Article In: Nature, vol. 437, no. 7059, pp. 681–686, 2005, ISSN: 0028-0836. Bopp, L; Aumont, O; Cadule, P; Alvain, S; Gehlen, M Response of diatoms distribution to global warming and potential implications: A global model study Journal Article In: Geophysical Research Letters, vol. 32, no. 19, pp. n/a–n/a, 2005, ISSN: 00948276. Gorgues, T; Menkes, C; Aumont, O; Vialard, J; Dandonneau, Y; Bopp, L Biogeochemical impact of tropical instability waves in the equatorial Pacific Journal Article In: Geophys. Res. Lett., vol. 32, no. 24, pp. L24615, 2005, ISSN: 0094-8276. Orr, James C; Aumont, Olivier; Yool, Andrew; Planner, Gian-Kasper; Joos, Fortunat; Maier-Reinier, Ernst; Weirig, Marie-France; Schlitzer, Reiner; Caldeira, Ken; Wickett, Michael E; undefined, Narrowing the uncertainty for deep-ocean injection efficiency Journal Article In: Papers and panel discussion, vol. 1, pp. 1481, 2005. Raynaud, S; Aumont, O; Rodgers, K B; Yiou, P; Orr, J C Interannual-to-decadal variability of North Atlantic air-sea CO2 fluxes Journal Article In: Ocean Science Discussions, vol. 2, no. 4, pp. 437–472, 2005. Quéré, Le C; Harrison, S P; Prentice, I C; Buitenhuis, E T; Aumont, O; Bopp, L; Cunha, Cotrim Da L; Geider, R; Giraud, X; Klaas, C; Kohfeld, K E; Legendre, L; Manizza, M; Platt, T; Rivkin, R B; Sathyendranath, S; Watson, Uitz J A J; Wolf-Gladrow, D Ecosystem dynamics based on plankton functional types for global ocean biogeochemistry models Journal Article In: Global Change Biology, vol. 11, pp. 2016–2040, 2005. Dandonneau, Yves; Menkes, Christophe; Gorgues, Thomas; Madec, Gurvan Oceanic Rossby Waves Acting As a "Hay Rake" for Ecosystem Floating By-Products Journal Article In: Science, vol. 302, no. 5650, pp. 1548–1551, 2004. Bopp, Laurent; Boucher, Olivier; Aumont, Olivier; Belviso, Sauveur; Dufresne, Jean-Louis; Pham, Mai; Monfray, Patrick Will marine dimethylsulfide emissions amplify or alleviate global warming? A model study Journal Article In: Canadian Journal of Fisheries and Aquatic Sciences, vol. 61, no. 5, pp. 826–835, 2004, ISSN: 0706-652X. Orr, James C; Aumont, Olivier; Yool, Andrew; Plattner, Gian-Kasper; Joos, Fortunat; Maier-Reimer, Ernst; Weirig, Marie-France; Schlitzer, Reiner; Caldeira, Ken; Wickett, M; undefined, Narrowing the uncertainty for deep-ocean injection efficiency Journal Article In: 2004. Matsumoto, K; Sarmiento, J L; Key, R M; Aumont, O; Bullister, J L; Caldeira, K; Campin, J -M; Doney, S C; Drange, H; Dutay, J -C; Follows, M; Gao, Y; Gnanadesikan, A; Gruber, N; Ishida, A; Joos, F; Lindsay, K; Maier-Reimer, E; Marshall, J C; Matear, R J; Monfray, P; Mouchet, A; Najjar, R; Plattner, G -K; Schlitzer, R; Slater, R; Swathi, P S; Totterdell, I J; Weirig, M -F; Yamanaka, Y; Yool, A; Orr, J C Evaluation of ocean carbon cycle models with data-based metrics Journal Article In: Geophysical Research Letters, vol. 31, no. 7, pp. L07303, 2004, ISSN: 1944-8007. Rodgers, Keith B; Aumont, Olivier; Madec, Gurvan; Menkes, Christophe; Blanke, Bruno; Monfray, Patrick; Orr, James C; Schrag, Daniel P Radiocarbon as a thermocline proxy for the eastern equatorial Pacific Journal Article In: Geophysical Research Letters, vol. 31, no. 14, pp. L14314, 2004, ISSN: 1944-8007. Aumont, Olivier; Maier-Reimer, Ernst; Blain, Stéphane; Monfray, P An ecosystem model of the global ocean including Fe, Si, P colimitations Journal Article In: Global Biogeochemical Cycles, vol. 17, no. 2, pp. n/a–n/a, 2003, ISSN: 08866236. Orr, James C; Aumont, Olivier; Yool, Andrew; Plattner, Gian-Kasper; Joos, Fortunat; Maier-Reimer, Ernst; Weirig, Marie-France; Schlitzer, Reiner; Caldeira, Ken; Wickett, Michael; Matear, Richard; Mignone, Bryan; Sarmiento, Jorge; Davison, John The Gosac Project to Predict the Efficiency of Ocean CO2 Sequestration Using 3-D Ocean Models Book Section In: Gale, J; Kaya, Y (Ed.): Greenhouse Gas Control Technologies, pp. 1691–1694, Pergamon, Oxford, 2003, ISBN: 978-0-08-044276-1. Boucher, O; Moulin, C; Belviso, S; Aumont, O; Bopp, L; Cosme, E; von Kuhlmann, R; Lawrence, M G; Pham, M; Reddy, M S; Sciare, J; Venkataraman, C In: Atmos. Chem. Phys., vol. 3, no. 1, pp. 49–65, 2003, ISSN: 1680-7324. Bopp, Laurent; Aumont, Olivier; Belviso, Sauveur; Monfray, Patrick Potential impact of climate change on marine dimethyl sulfide emissions Journal Article In: Tellus B, vol. 55, no. 1, pp. 11–22, 2003, ISSN: 1600-0889. Quéré, C Le; Aumont, O; Bopp, L; Bousquet, P; Ciais, P; Francey, R; Heimann, M; Keeling, C D; Keeling, R F; Kheshgi, H; Peylin, P; Piper, S C; Prentice, I C; Rayner, P J Two decades of ocean CO2 sink and variability Journal Article In: Tellus B, vol. 55, no. 2, pp. 649–656, 2003, ISSN: 1600-0889. Quéré, Corinne Le; Aumont, Olivier; Monfray, Patrick; Orr, James Propagation of climatic events on ocean stratification, marine biology, and CO2: Case studies over the 1979–1999 period Journal Article In: Journal of Geophysical Research: Oceans, vol. 108, no. C12, pp. 3375, 2003, ISSN: 2156-2202. Bopp, L; Kohfeld, K E; Quéré, Le C; Aumont, O Dust impact on marine biota and atmospheric pCO2 during glacial periods Journal Article In: Paleoceanography, vol. 18, pp. 10.1029/2002PA000810, 2003. Rodgers, K B; Blanke, B; Madec, G; Aumont, O; Ciais, P; Dutay, J C Extratropical sources of Equatorial Pacific upwelling in an OGCM Journal Article In: Geophys. Res. Lett., vol. 30, 2003. Bopp, L; Kohfeld, K E; Quéré, C Le; Aumont, O Dust impact on marine biota and atmospheric CO2 in glacial periods Journal Article In: Geochimica et Cosmochimica Acta, vol. 66, no. 15A, pp. A91–A91, 2002, ISSN: 0016-7037. Aumont, Olivier; Belviso, Sauveur; Monfray, Patrick In: Journal of Geophysical Research: Oceans (1978–2012), vol. 107, no. C4, pp. 4–1, 2002. Boucher, Olivier; Moulin, Cyril; Belviso, Sauveur; Aumont, Olivier; Bopp, Laurent; Cosme, E; Kuhlmann, R Von; Lawrence, M G; Pham, M; Reddy, M S; undefined, In: Atmospheric Chemistry and Physics Discussions, vol. 2, no. 4, pp. 1181–1216, 2002. Bopp, Laurent; Monfray, Patrick; Aumont, Olivier; Dufresne, Jean-Louis; Trent, Hervé Le; Madec, Gurvan; Terray, Laurent; Orr, James C Potential impact of climate change on marine export Journal Article In: Global Biogeochemical Cycles, vol. 15, no. 1, pp. 81–99, 2001. Aumont, Olivier; Orr, James C; Monfray, Patrick; Ludwig, Wolfgang; Amiotte-Suchet, Philippe; Probst, Jean-Luc Riverine-driven interhemispheric transport of carbon Journal Article In: Global Biogeochemical Cycles, vol. 15, no. 2, pp. 393–405, 2001, ISSN: 1944-9224. Quéré, Corinne Le; Orr, James C; Monfray, Patrick; Aumont, Olivier; Madec, Gurvan Interannual Variability of the Oceanic Sink of CO2 From 1979 Through 1997 Journal Article In: Global Biogeochemical Cycles, vol. 14, no. 4, pp. 1247–1265, 2000, ISSN: 0886-6236. Sarmiento, J L; Monfray, P; Maier-Reimer, E; Aumont, O; Murnane, R J; Orr, J C Sea-air CO2 fluxes and carbon transport: A comparison of three ocean general circulation models Journal Article In: Global Biogeochemical Cycles, vol. 14, no. 4, pp. 1267–1281, 2000, ISSN: 1944-9224. Belviso, S; Aumont, O; Bopp, L; Bréon, F -M; Couvert, P; Monfray, P In: Bostater, C R; Santoleri, R (Ed.): Remote Sensing of the Ocean and Sea Ice, vol. 4172, pp. 102-110, 2000.2007
@article{gorgues_indonesian_2007,
title = {Indonesian throughflow control of the eastern equatorial Pacific biogeochemistry},
author = {T Gorgues and C Menkes and O Aumont and Y Dandonneau and G Madec and K Rodgers},
url = {http://www.agu.org/pubs/crossref/2007/2006GL028210.shtml},
doi = {10.1029/2006GL028210},
issn = {0094-8276},
year = {2007},
date = {2007-01-01},
urldate = {2012-10-09},
journal = {Geophys. Res. Lett.},
volume = {34},
number = {5},
pages = {L05609},
abstract = {Two model simulations were performed to address the influence of the Indonesian throughflow (ITF) on the biogeochemical state of the equatorial Pacific. A simulation where the ITF is open is compared with an experiment where it is closed, and it is first shown that the impacts on the physical circulation are consistent with what has been found in previous modelling studies. In terms of biochemistry, closing the ITF results in increased iron concentration at the origin of the Equatorial Undercurrent (EUC). But the 11Sv of water otherwise transferred to the Indian Ocean remain in the equatorial Pacific, which result in a 30 m deepening of the thermocline/ferricline in the eastern Pacific. This deepening decreases the iron concentration of the equatorial wind driven upwelled water and cancels the iron increase advected by the EUC. The iron decrease of the equatorial upwelled water leads to decrease primary production by 15% along the equator.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Naegler2007,
title = {On evaluating ocean models with atmospheric potential oxygen},
author = {Tobias Naegler and Philippe Ciais and James C Orr and Olivier Aumont and Christian R\"{o}denbeck},
url = {http://onlinelibrary.wiley.com/doi/10.1111/j.1600-0889.2006.00197.x/full},
year = {2007},
date = {2007-01-01},
urldate = {2007-01-01},
journal = {Tellus B},
volume = {59},
number = {1},
pages = {138--156},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Najjar2007,
title = {Impact of circulation on export production, dissolved organic matter, and dissolved oxygen in the ocean: Results from Phase II of the Ocean Carbon-cycle Model Intercomparison Project (OCMIP-2)},
author = {R G Najjar and X Jin and F Louanchi and O Aumont and K Caldeira and S C Doney and J -C Dutay and M Follows and N Gruber and F Joos and K Lindsay and E Maier-Reimer and R J Matear and K Matsumoto and P Monfray and A Mouchet and J C Orr and G -K Plattner and J L Sarmiento and R Schlitzer and R D Slater and M -F Weirig and Y Yamanaka and A Yool},
url = {http://onlinelibrary.wiley.com/doi/10.1029/2006GB002857/abstract},
doi = {10.1029/2006GB002857},
issn = {1944-9224},
year = {2007},
date = {2007-01-01},
urldate = {2007-01-01},
journal = {Global Biogeochemical Cycles},
volume = {21},
number = {3},
pages = {GB3007},
abstract = {Results are presented of export production, dissolved organic matter (DOM) and dissolved oxygen simulated by 12 global ocean models participating in the second phase of the Ocean Carbon-cycle Model Intercomparison Project. A common, simple biogeochemical model is utilized in different coarse-resolution ocean circulation models. The model mean (ensuremathpm1ensuremathsigma) downward flux of organic matter across 75 m depth is 17 ensuremathpm 6 Pg C yr-1. Model means of globally averaged particle export, the fraction of total export in dissolved form, surface semilabile dissolved organic carbon (DOC), and seasonal net outgassing (SNO) of oxygen are in good agreement with observation-based estimates, but particle export and surface DOC are too high in the tropics. There is a high sensitivity of the results to circulation, as evidenced by (1) the correlation of surface DOC and export with circulation metrics, including chlorofluorocarbon inventory and deep-ocean radiocarbon, (2) very large intermodel differences in Southern Ocean export, and (3) greater export production, fraction of export as DOM, and SNO in models with explicit mixed layer physics. However, deep-ocean oxygen, which varies widely among the models, is poorly correlated with other model indices. Cross-model means of several biogeochemical metrics show better agreement with observation-based estimates when restricted to those models that best simulate deep-ocean radiocarbon. Overall, the results emphasize the importance of physical processes in marine biogeochemical modeling and suggest that the development of circulation models can be accelerated by evaluating them with marine biogeochemical metrics.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Gehlen2007,
title = {The fate of pelagic CaCO3 production in a high CO2 ocean: a model study},
author = {M Gehlen and R Gangst\o and B Schneider and L Bopp and O Aumont and C Ethe},
url = {http://www.biogeosciences.net/4/505/2007/},
doi = {10.5194/bg-4-505-2007},
issn = {1726-4189},
year = {2007},
date = {2007-01-01},
urldate = {2007-01-01},
journal = {Biogeosciences},
volume = {4},
number = {4},
pages = {505--519},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
2006
@article{Buitenhuis2005,
title = {Biogeochemical fluxes through mesozooplankton},
author = {E Buitenhuis and Le C Qu\'{e}r\'{e} and O Aumont and A Bunker and A Hirst and T Ikeda and T O'Brien and S Pontkiovski and D Straile},
url = {https://agupubs.onlinelibrary.wiley.com/doi/full/10.1029/2005GB002511},
doi = {10.1029/2005GB002511},
year = {2006},
date = {2006-04-08},
urldate = {2005-01-01},
journal = {Global Biogeochem. Cycles},
note = {Submitted},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Carr2006,
title = {A comparison of global estimates of marine primary production from ocean color},
author = {Mary-Elena Carr and Marjorie A M Friedrichs and Marjorie Schmeltz and Maki Noguchi Aita and David Antoine and Kevin R Arrigo and Ichio Asanuma and Olivier Aumont and Richard Barber and Michael Behrenfeld and Robert Bidigare and Erik T Buitenhuis and Janet Campbell and Aurea Ciotti and Heidi Dierssen and Mark Dowell and John Dunne and Wayne Esaias and Bernard Gentili and Watson Gregg and Steve Groom and Nicolas Hoepffner and Joji Ishizaka and Takahiko Kameda and Corinne Le Qu\'{e}r\'{e} and Steven Lohrenz and John Marra and Fr\'{e}d\'{e}ric M\'{e}lin and Keith Moore and Andr\'{e} Morel and Tasha E Reddy and John Ryan and Michele Scardi and Tim Smyth and Kevin Turpie and Gavin Tilstone and Kirk Waters and Yasuhiro Yamanaka},
url = {http://www.sciencedirect.com/science/article/pii/S0967064506000555},
doi = {10.1016/j.dsr2.2006.01.028},
issn = {0967-0645},
year = {2006},
date = {2006-03-01},
urldate = {2006-03-01},
journal = {Deep Sea Research Part II: Topical Studies in Oceanography},
volume = {53},
number = {5\textendash7},
pages = {741--770},
abstract = {The third primary production algorithm round robin (PPARR3) compares output from 24 models that estimate depth-integrated primary production from satellite measurements of ocean color, as well as seven general circulation models (GCMs) coupled with ecosystem or biogeochemical models. Here we compare the global primary production fields corresponding to eight months of 1998 and 1999 as estimated from common input fields of photosynthetically-available radiation (PAR), sea-surface temperature (SST), mixed-layer depth, and chlorophyll concentration. We also quantify the sensitivity of the ocean-color-based models to perturbations in their input variables. The pair-wise correlation between ocean-color models was used to cluster them into groups or related output, which reflect the regions and environmental conditions under which they respond differently. The groups do not follow model complexity with regards to wavelength or depth dependence, though they are related to the manner in which temperature is used to parameterize photosynthesis. Global average PP varies by a factor of two between models. The models diverged the most for the Southern Ocean, SST under ensuremath\<img height="13" border="0" style="vertical-align:bottom" width="36" alt="View the MathML source" title="View the MathML source" src="http://origin-ars.els-cdn.com/content/image/1-s2.0-S0967064506000555-si20.gif"ensuremath\>10ensuremathcircC, and chlorophyll concentration exceeding 1 mg Chl m-3m-3. Based on the conditions under which the model results diverge most, we conclude that current ocean-color-based models are challenged by high-nutrient low-chlorophyll conditions, and extreme temperatures or chlorophyll concentrations. The GCM-based models predict comparable primary production to those based on ocean color: they estimate higher values in the Southern Ocean, at low SST, and in the equatorial band, while they estimate lower values in eutrophic regions (probably because the area of high chlorophyll concentrations is smaller in the GCMs). Further progress in primary production modeling requires improved understanding of the effect of temperature on photosynthesis and better parameterization of the maximum photosynthetic rate.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{aumont_globalizing_2006,
title = {Globalizing results from ocean in situ iron fertilization studies},
author = {O Aumont and L Bopp},
url = {http://doi.wiley.com/10.1029/2005GB002591},
doi = {10.1029/2005GB002591},
issn = {08866236},
year = {2006},
date = {2006-01-01},
urldate = {2016-07-09},
journal = {Global Biogeochemical Cycles},
volume = {20},
number = {2},
pages = {n/a--n/a},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Gehlen2006,
title = {Reconciling surface ocean productivity, export fluxes and sediment composition in a global biogeochemical ocean model},
author = {M Gehlen and L Bopp and N Emprin and O Aumont and C Heinze and I Kriest and O Ragueneau},
url = {https://bg.copernicus.org/articles/3/521/2006/},
doi = {10.5194/bg-3-521-2006},
year = {2006},
date = {2006-01-01},
urldate = {2006-01-01},
journal = {Biogeosciences},
volume = {3},
pages = {521--537},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Raynaud2006,
title = {Interannual-to-decadal variability of North Atlantic air-sea CO2 fluxes},
author = {S Raynaud and J C Orr and O Aumont and K B Rodgers and P Yiou},
url = {http://www.ocean-sci.net/2/43/2006/},
issn = {1812-0792},
year = {2006},
date = {2006-01-01},
urldate = {2006-01-01},
journal = {Ocean Sci.},
volume = {2},
number = {1},
pages = {43--60},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
2005
@article{Orr2005,
title = {Anthropogenic ocean acidification over the twenty-first century and its impact on calcifying organisms},
author = {James C Orr and Victoria J Fabry and Olivier Aumont and Laurent Bopp and Scott C Doney and Richard A Feely and Anand Gnanadesikan and Nicolas Gruber and Akio Ishida and Fortunat Joos and Robert M Key and Keith Lindsay and Ernst Maier-Reimer and Richard Matear and Patrick Monfray and Anne Mouchet and Raymond G Najjar and Gian-Kasper Plattner and Keith B Rodgers and Christopher L Sabine and Jorge L Sarmiento and Reiner Schlitzer and Richard D Slater and Ian J Totterdell and Marie-France Weirig and Yasuhiro Yamanaka and Andrew Yool},
url = {http://www.nature.com/nature/journal/v437/n7059/abs/nature04095.html},
doi = {10.1038/nature04095},
issn = {0028-0836},
year = {2005},
date = {2005-09-01},
urldate = {2005-09-01},
journal = {Nature},
volume = {437},
number = {7059},
pages = {681--686},
abstract = {Today's surface ocean is saturated with respect to calcium carbonate, but increasing atmospheric carbon dioxide concentrations are reducing ocean pH and carbonate ion concentrations, and thus the level of calcium carbonate saturation. Experimental evidence suggests that if these trends continue, key marine organisms\textemdashsuch as corals and some plankton\textemdashwill have difficulty maintaining their external calcium carbonate skeletons. Here we use 13 models of the ocean\textendashcarbon cycle to assess calcium carbonate saturation under the IS92a 'business-as-usual' scenario for future emissions of anthropogenic carbon dioxide. In our projections, Southern Ocean surface waters will begin to become undersaturated with respect to aragonite, a metastable form of calcium carbonate, by the year 2050. By 2100, this undersaturation could extend throughout the entire Southern Ocean and into the subarctic Pacific Ocean. When live pteropods were exposed to our predicted level of undersaturation during a two-day shipboard experiment, their aragonite shells showed notable dissolution. Our findings indicate that conditions detrimental to high-latitude ecosystems could develop within decades, not centuries as suggested previously.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{bopp_response_2005,
title = {Response of diatoms distribution to global warming and potential implications: A global model study},
author = {L Bopp and O Aumont and P Cadule and S Alvain and M Gehlen},
url = {http://doi.wiley.com/10.1029/2005GL023653},
doi = {10.1029/2005GL023653},
issn = {00948276},
year = {2005},
date = {2005-01-01},
urldate = {2016-07-09},
journal = {Geophysical Research Letters},
volume = {32},
number = {19},
pages = {n/a--n/a},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{gorgues_biogeochemical_2005,
title = {Biogeochemical impact of tropical instability waves in the equatorial Pacific},
author = {T Gorgues and C Menkes and O Aumont and J Vialard and Y Dandonneau and L Bopp},
url = {http://www.agu.org/pubs/crossref/2005/2005GL024110.shtml},
doi = {10.1029/2005GL024110},
issn = {0094-8276},
year = {2005},
date = {2005-01-01},
urldate = {2012-10-09},
journal = {Geophys. Res. Lett.},
volume = {32},
number = {24},
pages = {L24615},
abstract = {Tropical Instability Waves (TIW) have been suggested to fertilize the equatorial Pacific in iron leading to enhanced ecosystem productivity. Using a coupled dynamical\textendashbiogeochemical model, we show that contrary to this suggestion, TIWs induce a decrease of iron concentration by 10% at the equator and by about 3% over the Wyrtki box [90°W\textendash180, 5°N\textendash5°S]. Chlorophyll decreases by 10% at the equator and 1% over the Wyrtki box. This leads to a decrease of new production up to 10% at the equator (4% over the Wyrtki box). TIW-induced horizontal advection exports iron-rich equatorial water to the north, but also brings iron-depleted water to the equator leading to a net decrease in iron. Additional iron decrease is caused by TIW-induced iron vertical diffusion. These two mechanisms are partly counter balanced by a decrease of iron biological uptake, driven by lower phytoplankton concentrations, and to a lesser extent by TIW-induced iron vertical advection.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Orr2005b,
title = {Narrowing the uncertainty for deep-ocean injection efficiency},
author = {James C Orr and Olivier Aumont and Andrew Yool and Gian-Kasper Planner and Fortunat Joos and Ernst Maier-Reinier and Marie-France Weirig and Reiner Schlitzer and Ken Caldeira and Michael E Wickett and undefined},
url = {https://www.sciencedirect.com/science/article/pii/B9780080447049501683},
doi = {10.1016/B978-008044704-9/50168-3},
year = {2005},
date = {2005-01-01},
urldate = {2005-01-01},
journal = {Papers and panel discussion},
volume = {1},
pages = {1481},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Raynaud2005a,
title = {Interannual-to-decadal variability of North Atlantic air-sea CO2 fluxes},
author = {S Raynaud and O Aumont and K B Rodgers and P Yiou and J C Orr},
url = {https://hal.archives-ouvertes.fr/hal-00331127/document},
year = {2005},
date = {2005-01-01},
urldate = {2005-01-01},
journal = {Ocean Science Discussions},
volume = {2},
number = {4},
pages = {437--472},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Quere2005,
title = {Ecosystem dynamics based on plankton functional types for global ocean biogeochemistry models},
author = {Le C Qu\'{e}r\'{e} and S P Harrison and I C Prentice and E T Buitenhuis and O Aumont and L Bopp and Cotrim Da L Cunha and R Geider and X Giraud and C Klaas and K E Kohfeld and L Legendre and M Manizza and T Platt and R B Rivkin and S Sathyendranath and Uitz J A J Watson and D Wolf-Gladrow},
url = {https://onlinelibrary.wiley.com/doi/full/10.1111/j.1365-2486.2005.1004.x},
doi = {10.1111/j.1365-2486.2005.1004.x},
year = {2005},
date = {2005-01-01},
urldate = {2005-01-01},
journal = {Global Change Biology},
volume = {11},
pages = {2016--2040},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
2004
@article{dandonneau_response_2004,
title = {Oceanic Rossby Waves Acting As a "Hay Rake" for Ecosystem Floating By-Products},
author = {Yves Dandonneau and Christophe Menkes and Thomas Gorgues and Gurvan Madec},
url = {https://www.science.org/doi/abs/10.1126/science.1090729},
doi = {10.1126/science.1090729},
year = {2004},
date = {2004-04-01},
urldate = {2004-04-01},
journal = {Science},
volume = {302},
number = {5650},
pages = {1548--1551},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Bopp2004,
title = {Will marine dimethylsulfide emissions amplify or alleviate global warming? A model study},
author = {Laurent Bopp and Olivier Boucher and Olivier Aumont and Sauveur Belviso and Jean-Louis Dufresne and Mai Pham and Patrick Monfray},
url = {http://www.nrcresearchpress.com/doi/abs/10.1139/f04-045},
doi = {10.1139/f04-045},
issn = {0706-652X},
year = {2004},
date = {2004-01-01},
urldate = {2004-01-01},
journal = {Canadian Journal of Fisheries and Aquatic Sciences},
volume = {61},
number = {5},
pages = {826--835},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Orr2004,
title = {Narrowing the uncertainty for deep-ocean injection efficiency},
author = {James C Orr and Olivier Aumont and Andrew Yool and Gian-Kasper Plattner and Fortunat Joos and Ernst Maier-Reimer and Marie-France Weirig and Reiner Schlitzer and Ken Caldeira and M Wickett and undefined},
url = {http://epic.awi.de/9939/1/Orr2004a.pdf},
year = {2004},
date = {2004-01-01},
urldate = {2004-01-01},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Matsumoto2004,
title = {Evaluation of ocean carbon cycle models with data-based metrics},
author = {K Matsumoto and J L Sarmiento and R M Key and O Aumont and J L Bullister and K Caldeira and J -M Campin and S C Doney and H Drange and J -C Dutay and M Follows and Y Gao and A Gnanadesikan and N Gruber and A Ishida and F Joos and K Lindsay and E Maier-Reimer and J C Marshall and R J Matear and P Monfray and A Mouchet and R Najjar and G -K Plattner and R Schlitzer and R Slater and P S Swathi and I J Totterdell and M -F Weirig and Y Yamanaka and A Yool and J C Orr},
url = {http://onlinelibrary.wiley.com/doi/10.1029/2003GL018970/abstract},
doi = {10.1029/2003GL018970},
issn = {1944-8007},
year = {2004},
date = {2004-01-01},
urldate = {2004-01-01},
journal = {Geophysical Research Letters},
volume = {31},
number = {7},
pages = {L07303},
abstract = {New radiocarbon and chlorofluorocarbon-11 data from the World Ocean Circulation Experiment are used to assess a suite of 19 ocean carbon cycle models. We use the distributions and inventories of these tracers as quantitative metrics of model skill and find that only about a quarter of the suite is consistent with the new data-based metrics. This should serve as a warning bell to the larger community that not all is well with current generation of ocean carbon cycle models. At the same time, this highlights the danger in simply using the available models to represent the state-of-the-art modeling without considering the credibility of each model.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Rodgers2004,
title = {Radiocarbon as a thermocline proxy for the eastern equatorial Pacific},
author = {Keith B Rodgers and Olivier Aumont and Gurvan Madec and Christophe Menkes and Bruno Blanke and Patrick Monfray and James C Orr and Daniel P Schrag},
url = {http://onlinelibrary.wiley.com/doi/10.1029/2004GL019764/abstract},
doi = {10.1029/2004GL019764},
issn = {1944-8007},
year = {2004},
date = {2004-01-01},
urldate = {2004-01-01},
journal = {Geophysical Research Letters},
volume = {31},
number = {14},
pages = {L14314},
abstract = {An ocean model is used to test the idea that sea surface ensuremathDelta14C behaves as a thermocline proxy in the eastern equatorial Pacific. The ORCA2 model, which includes ensuremathDelta14C as a passive tracer, has been forced with reanalysis fluxes over 1948\textendash1999, and the output is compared with a previously reported Galapagos ensuremathDelta14C record. The model reproduces the abrupt increase in the seasonally minimum ensuremathDelta14C in 1976/77 found in the data. This increase is associated with neither a shift of thermocline depth over the NINO3 region, nor a change in the relative proportion of Northern/Southern source waters. Rather, it is due to a decrease in the Sub-Antarctic Mode Water (SAMW) component of the upwelling water, thereby representing a decrease in entrainment of water from below the base of the directly ventilated thermocline.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
2003
@article{aumont_ecosystem_2003,
title = {An ecosystem model of the global ocean including Fe, Si, P colimitations},
author = {Olivier Aumont and Ernst Maier-Reimer and St\'{e}phane Blain and P Monfray},
url = {http://doi.wiley.com/10.1029/2001GB001745},
doi = {10.1029/2001GB001745},
issn = {08866236},
year = {2003},
date = {2003-06-01},
urldate = {2016-07-10},
journal = {Global Biogeochemical Cycles},
volume = {17},
number = {2},
pages = {n/a--n/a},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@incollection{Orr2003,
title = {The Gosac Project to Predict the Efficiency of Ocean CO2 Sequestration Using 3-D Ocean Models},
author = {James C Orr and Olivier Aumont and Andrew Yool and Gian-Kasper Plattner and Fortunat Joos and Ernst Maier-Reimer and Marie-France Weirig and Reiner Schlitzer and Ken Caldeira and Michael Wickett and Richard Matear and Bryan Mignone and Jorge Sarmiento and John Davison},
editor = {J Gale and Y Kaya},
doi = {10.1016/B978-008044276-1/50277-4},
isbn = {978-0-08-044276-1},
year = {2003},
date = {2003-01-01},
urldate = {2017-04-13},
booktitle = {Greenhouse Gas Control Technologies},
pages = {1691--1694},
publisher = {Pergamon},
address = {Oxford},
keywords = {},
pubstate = {published},
tppubtype = {incollection}
}
@article{Boucher2003,
title = {DMS atmospheric concentrations and sulphate aerosol indirect radiative forcing: a sensitivity study to the DMS source representation and oxidation},
author = {O Boucher and C Moulin and S Belviso and O Aumont and L Bopp and E Cosme and R von Kuhlmann and M G Lawrence and M Pham and M S Reddy and J Sciare and C Venkataraman},
url = {http://www.atmos-chem-phys.net/3/49/2003/},
doi = {10.5194/acp-3-49-2003},
issn = {1680-7324},
year = {2003},
date = {2003-01-01},
urldate = {2003-01-01},
journal = {Atmos. Chem. Phys.},
volume = {3},
number = {1},
pages = {49--65},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Bopp2003b,
title = {Potential impact of climate change on marine dimethyl sulfide emissions},
author = {Laurent Bopp and Olivier Aumont and Sauveur Belviso and Patrick Monfray},
url = {http://onlinelibrary.wiley.com/doi/10.1034/j.1600-0889.2003.042.x/abstract},
doi = {10.1034/j.1600-0889.2003.042.x},
issn = {1600-0889},
year = {2003},
date = {2003-01-01},
urldate = {2003-01-01},
journal = {Tellus B},
volume = {55},
number = {1},
pages = {11--22},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{LeQuere2003a,
title = {Two decades of ocean CO2 sink and variability},
author = {C Le Qu\'{e}r\'{e} and O Aumont and L Bopp and P Bousquet and P Ciais and R Francey and M Heimann and C D Keeling and R F Keeling and H Kheshgi and P Peylin and S C Piper and I C Prentice and P J Rayner},
url = {http://onlinelibrary.wiley.com/doi/10.1034/j.1600-0889.2003.00043.x/abstract},
doi = {10.1034/j.1600-0889.2003.00043.x},
issn = {1600-0889},
year = {2003},
date = {2003-01-01},
urldate = {2003-01-01},
journal = {Tellus B},
volume = {55},
number = {2},
pages = {649--656},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{LeQuere2003,
title = {Propagation of climatic events on ocean stratification, marine biology, and CO2: Case studies over the 1979\textendash1999 period},
author = {Corinne Le Qu\'{e}r\'{e} and Olivier Aumont and Patrick Monfray and James Orr},
url = {http://onlinelibrary.wiley.com/doi/10.1029/2001JC000920/abstract},
doi = {10.1029/2001JC000920},
issn = {2156-2202},
year = {2003},
date = {2003-01-01},
urldate = {2003-01-01},
journal = {Journal of Geophysical Research: Oceans},
volume = {108},
number = {C12},
pages = {3375},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Bopp2003,
title = {Dust impact on marine biota and atmospheric pCO2 during glacial periods},
author = {L Bopp and K E Kohfeld and Le C Qu\'{e}r\'{e} and O Aumont},
doi = {10.1029/2002PA000810},
year = {2003},
date = {2003-01-01},
urldate = {2003-01-01},
journal = {Paleoceanography},
volume = {18},
pages = {10.1029/2002PA000810},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Rodgers2003,
title = {Extratropical sources of Equatorial Pacific upwelling in an OGCM},
author = {K B Rodgers and B Blanke and G Madec and O Aumont and P Ciais and J C Dutay},
doi = {10.1029/2002GL016003},
year = {2003},
date = {2003-01-01},
urldate = {2003-01-01},
journal = {Geophys. Res. Lett.},
volume = {30},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
2002
@article{Bopp2002,
title = {Dust impact on marine biota and atmospheric CO2 in glacial periods},
author = {L Bopp and K E Kohfeld and C Le Qu\'{e}r\'{e} and O Aumont},
url = {http://hdl.handle.net/11858/00-001M-0000-000E-CEB6-D},
issn = {0016-7037},
year = {2002},
date = {2002-01-01},
urldate = {2002-01-01},
journal = {Geochimica et Cosmochimica Acta},
volume = {66},
number = {15A},
pages = {A91--A91},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Aumont2002,
title = {Dimethylsulfoniopropionate (DMSP) and dimethylsulfide (DMS) sea surface distributions simulated from a global three-dimensional ocean carbon cycle model},
author = {Olivier Aumont and Sauveur Belviso and Patrick Monfray},
url = {http://onlinelibrary.wiley.com/doi/10.1029/1999JC000111/full},
year = {2002},
date = {2002-01-01},
urldate = {2002-01-01},
journal = {Journal of Geophysical Research: Oceans (1978\textendash2012)},
volume = {107},
number = {C4},
pages = {4--1},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Boucher2002,
title = {Sensitivity study of dimethylsulphide (DMS) atmospheric concentrations and sulphate aerosol indirect radiative forcing to the DMS source representation and oxidation},
author = {Olivier Boucher and Cyril Moulin and Sauveur Belviso and Olivier Aumont and Laurent Bopp and E Cosme and R Von Kuhlmann and M G Lawrence and M Pham and M S Reddy and undefined},
url = {http://hal.ird.fr/hal-00327795/},
year = {2002},
date = {2002-01-01},
urldate = {2002-01-01},
journal = {Atmospheric Chemistry and Physics Discussions},
volume = {2},
number = {4},
pages = {1181--1216},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
2001
@article{Bopp2001,
title = {Potential impact of climate change on marine export},
author = {Laurent Bopp and Patrick Monfray and Olivier Aumont and Jean-Louis Dufresne and Herv\'{e} Le Trent and Gurvan Madec and Laurent Terray and James C Orr},
url = {http://www.researchgate.net/profile/Patrick_Monfray2/publication/247215532_Potential_impact_of_climate_change_on_marine_export_production/links/53d03e680cf2f7e53cfb7206.pdf},
year = {2001},
date = {2001-01-01},
urldate = {2001-01-01},
journal = {Global Biogeochemical Cycles},
volume = {15},
number = {1},
pages = {81--99},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Aumont2001a,
title = {Riverine-driven interhemispheric transport of carbon},
author = {Olivier Aumont and James C Orr and Patrick Monfray and Wolfgang Ludwig and Philippe Amiotte-Suchet and Jean-Luc Probst},
url = {http://onlinelibrary.wiley.com/doi/10.1029/1999GB001238/abstract},
doi = {10.1029/1999GB001238},
issn = {1944-9224},
year = {2001},
date = {2001-01-01},
urldate = {2001-01-01},
journal = {Global Biogeochemical Cycles},
volume = {15},
number = {2},
pages = {393--405},
abstract = {Controversy surrounds the role of the ocean in interhemispheric transport of carbon. On one hand, observations in the atmosphere and in the ocean both seem to imply that the preindustrial ocean transported up to 1 Pg C yr-1 from the Northern to the Southern Hemisphere. On the other hand, three dimensional (3-D) ocean models suggest that global interhemispheric transport of carbon is near zero. However, in this debate, there has been a general neglect of the river carbon loop. The river carbon loop includes (1) uptake of atmospheric carbon due to inorganic and organic erosion on land, (2) transport of carbon by rivers, (3) subsequent transport of riverine carbon by the ocean, and (4) loss of riverine carbon back to the atmosphere by air-sea gas exchange. Although carbon fluxes from rivers are small compared to natural fluxes, they have the potential to contribute substantially to the net air-sea fluxes of CO2. For insight into this dilemma, we coupled carbon fluxes from a global model of continental erosion to a 3-D global carbon-cycle model of the ocean. With rivers, total southward interhemispheric transport by the ocean increases from 0.1 to 0.35ensuremathpm0.08 Pg C yr-1, in agreement with oceanographic observations. Resulting air-sea fluxes of riverine carbon and uptake of CO2 by land erosion were installed as boundary conditions in a 3-D atmospheric model. The assymetry in these fluxes drives a preindustrial atmospheric gradient of CO2 at the surface of -0.6ensuremathpm0.1 ensuremathmuatm for the North Pole minus the South Pole and longitudinal variations that exceed 0.5 ensuremathmuatm. Conversely, the gradient for Mauna Loa minus South Pole is only -0.2ensuremathpm0.1 ensuremathmuatm, much less than the -0.8 ensuremathmuatm gradient extrapolated linearly from historical atmospheric CO2 measurements from the same two sites. The difference may be explained by the role of the terrestrial biosphere. Regardless, the river loop produces large gradients both meridionally and zonally. Accounting for the river carbon loop changes current estimates of the regional distribution of sources and sinks of CO2, particularly concerning partitioning between natural and anthropogenic processes.},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
2000
@article{LeQuere2000,
title = {Interannual Variability of the Oceanic Sink of CO2 From 1979 Through 1997},
author = {Corinne Le Qu\'{e}r\'{e} and James C Orr and Patrick Monfray and Olivier Aumont and Gurvan Madec},
url = {http://www.agu.org/pubs/crossref/2000/1999GB900049.shtml},
issn = {0886-6236},
year = {2000},
date = {2000-01-01},
urldate = {2000-01-01},
journal = {Global Biogeochemical Cycles},
volume = {14},
number = {4},
pages = {1247--1265},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@article{Sarmiento2000a,
title = {Sea-air CO2 fluxes and carbon transport: A comparison of three ocean general circulation models},
author = {J L Sarmiento and P Monfray and E Maier-Reimer and O Aumont and R J Murnane and J C Orr},
url = {http://onlinelibrary.wiley.com/doi/10.1029/1999GB900062/abstract},
doi = {10.1029/1999GB900062},
issn = {1944-9224},
year = {2000},
date = {2000-01-01},
urldate = {2000-01-01},
journal = {Global Biogeochemical Cycles},
volume = {14},
number = {4},
pages = {1267--1281},
keywords = {},
pubstate = {published},
tppubtype = {article}
}
@incollection{Belviso2000,
title = {Assessment of the Marine Biota DMS-cloud climate hypothesis using remotely sensed data and an ocean general circulation model},
author = {S Belviso and O Aumont and L Bopp and F -M Br\'{e}on and P Couvert and P Monfray},
editor = {C R Bostater and R Santoleri},
doi = {10.1117/12.411692},
year = {2000},
date = {2000-01-01},
urldate = {2000-01-01},
booktitle = {Remote Sensing of the Ocean and Sea Ice},
volume = {4172},
pages = {102-110},
series = {Proceedings of SPIE},
keywords = {},
pubstate = {published},
tppubtype = {incollection}
}